Skip to contents

A data.frame of mapping from amino acids to codons

Usage

aa2codon

Format

a data.frame with two columns: amino_acid, and codon.

amino_acid

amino acid corresponding to the codon

codon

codon identity

Source

It is actually the standard genetic code.

Examples

aa2codon
#>    amino_acid codon
#> 1           *   TAA
#> 2           *   TAG
#> 3           *   TGA
#> 4         Ala   GCT
#> 5         Ala   GCC
#> 6         Ala   GCA
#> 7         Ala   GCG
#> 8         Arg   CGT
#> 9         Arg   CGC
#> 10        Arg   CGA
#> 11        Arg   CGG
#> 12        Arg   AGA
#> 13        Arg   AGG
#> 14        Asn   AAT
#> 15        Asn   AAC
#> 16        Asp   GAT
#> 17        Asp   GAC
#> 18        Cys   TGT
#> 19        Cys   TGC
#> 20        Gln   CAA
#> 21        Gln   CAG
#> 22        Glu   GAA
#> 23        Glu   GAG
#> 24        Gly   GGT
#> 25        Gly   GGC
#> 26        Gly   GGA
#> 27        Gly   GGG
#> 28        His   CAT
#> 29        His   CAC
#> 30        Ile   ATT
#> 31        Ile   ATC
#> 32        Ile   ATA
#> 33        Leu   TTA
#> 34        Leu   TTG
#> 35        Leu   CTT
#> 36        Leu   CTC
#> 37        Leu   CTA
#> 38        Leu   CTG
#> 39        Lys   AAA
#> 40        Lys   AAG
#> 41        Met   ATG
#> 42        Phe   TTT
#> 43        Phe   TTC
#> 44        Pro   CCT
#> 45        Pro   CCC
#> 46        Pro   CCA
#> 47        Pro   CCG
#> 48        Ser   TCT
#> 49        Ser   TCC
#> 50        Ser   TCA
#> 51        Ser   TCG
#> 52        Ser   AGT
#> 53        Ser   AGC
#> 54        Thr   ACT
#> 55        Thr   ACC
#> 56        Thr   ACA
#> 57        Thr   ACG
#> 58        Trp   TGG
#> 59        Tyr   TAT
#> 60        Tyr   TAC
#> 61        Val   GTT
#> 62        Val   GTC
#> 63        Val   GTA
#> 64        Val   GTG