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show available codon tables

Source: R/codon_info.R
show_codon_tables.Rd

show_codon_tables print a table of available genetic code from NCBI through Biostrings::GENETIC_CODE_TABLE.

Usage

show_codon_tables()

Value

No return value (NULL). Available codon tables will be printed out directly.

Examples

# print available NCBI codon table IDs and descriptions.
show_codon_tables()
#>  1: Standard
#>  2: Vertebrate Mitochondrial
#>  3: Yeast Mitochondrial
#>  4: Mold Mitochondrial; Protozoan Mitochondrial; Coelenterate Mitochondrial; Mycoplasma; Spiroplasma
#>  5: Invertebrate Mitochondrial
#>  6: Ciliate Nuclear; Dasycladacean Nuclear; Hexamita Nuclear
#>  9: Echinoderm Mitochondrial; Flatworm Mitochondrial
#> 10: Euplotid Nuclear
#> 11: Bacterial, Archaeal and Plant Plastid
#> 12: Alternative Yeast Nuclear
#> 13: Ascidian Mitochondrial
#> 14: Alternative Flatworm Mitochondrial
#> 15: Blepharisma Macronuclear
#> 16: Chlorophycean Mitochondrial
#> 21: Trematode Mitochondrial
#> 22: Scenedesmus obliquus Mitochondrial
#> 23: Thraustochytrium Mitochondrial
#> 24: Pterobranchia Mitochondrial
#> 25: Candidate Division SR1 and Gracilibacteria
#> 26: Pachysolen tannophilus Nuclear