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yeast tRNA gene copy numbers (GCN)

Source: R/data.R
yeast_trna_gcn.Rd

Yeast tRNA gene copy numbers (GCN) by anticodon obtained from gtRNAdb.

Usage

yeast_trna_gcn

Format

a named vector with a length of 41. Value names are anticodons.

Source

<http://gtrnadb.ucsc.edu/genomes/eukaryota/Scere3/sacCer3-mature-tRNAs.fa>

References

Chan PP, Lowe TM. 2016. GtRNAdb 2.0: an expanded database of transfer RNA genes identified in complete and draft genomes. Nucleic Acids Res 44:D184-189.

Examples

yeast_trna_gcn
#> 
#> AAC AAT ACG AGA AGC AGG AGT CAA CAC CAT CCA CCC CCG CCT CGA CGT CTC CTG CTT GAA 
#>  14  13   6  11  11   2  11  10   2  10   6   2   1   1   1   1   2   1  14  10 
#> GAG GCA GCC GCT GTA GTC GTG GTT TAA TAC TAG TAT TCC TCT TGA TGC TGG TGT TTC TTG 
#>   1   4  16   2   8  16   7  10   7   2   3   2   3  11   3   5  10   4  14   9 
#> TTT 
#>   7